Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015896893.1_cds_XP_016447982.1_42684
CDS Infomation

[gene=LOC107773047] [db_xref=GeneID:107773047] [protein=glucan endo-1,3-beta-glucosidase 8-like] [protein_id=XP_016447982.1] [location=complement(join(69598..70699,71849..72189))] [gbkey=CDS]
Sequence

ATGTTGAGACTTGGTGTTTTAGTAGTAGTATTATATTTCCTGGTATATTTGGGTGATAAT
AAAAGAAGTGTTGAAGGGCTAGGAGTAAACTGGGGAACAATGGCAAGCCACCCATTGGAG
CCAAAAATAGTGGTGCAAATGCTGAAGGAGAATGGTATAAAGAAAGTGAAACTCTTTGAT
GCAGATAAAACATCCATGAACGCACTAGCAGGTACTGATATTGAAGTTATGGTTGCCATT
CCTAATGATCAACTTCTTACTATGACTGATTATGATCGAGCTAAAGATTGGGTTAGACGC
AATGTCACTCGCTACAATATCAAATCAGGTGTCAACATCAAATATGTGGCAGTTGGTAAT
GAGCCTTTTTTGACAGCCTACAACAACTCCTTTGTGAACTTAACATTCCCAGCTCTACAG
AATATCCAAAATGCACTAAATGAAGCAGGAGTAGGGGACTACATAAAAGCAACTGTACCA
CTAAATGCTGATGTCTATTTCTCACCAGAGTCTAATCCTGTACCTTCTGCTGGTAGATTC
CGGCCCGATATAGCTGAACTAATGACACAGATTGTTCAATTCATGAGCAAGAACCAAGCA
CCCTTTACTGTAAACATTTACCCCTTTCTAAGTCTTTATGCCAATGAACATTTCCCATTT
GACTTTGCTTTCTTTGATGGTGCTAGCAACCCTGTTGTCGATAATGGGGTCGAGTACACC
AATGTCTTTGATGCCAACTTTGATACCCTCTATTCAGCATTAAAAGCAGTTGGTTATGGC
AATACGACCATTCTAGTTGGAGAAGTTGGTTGGCCTACAGATGGTGACAAGAATGCTAAT
TTAAACAACGCGTATCGATTCTATAAAGGACTGTTTTCCAGGCTTGGAGCTAACAAAGGA
ACACCCCTTAGACCTGGATACATTGAAGTTTACTTGTTTGGACTAATTGATGAGGATGCT
AAAAGTATTGCTCCTGGTAATTTCGAGCGACACTGGGGAATTTTTCGATACGATGGGCAG
CCAAAGTTTGCTATGGACATTTCAGGTCAGGGACACGAAAAGCATCTTGTTGCTGCAAAA
AATGTGCAATATCTACCTAAAAGATGGTGCATGCTTAATCCAAATGCTAATAATTTGAGC
ATACTTGCTAATAACATTGACTATGCTTGCACATTCTCAGATTGTACAGCATTAGGATAT
GGTTCTTCTTGCAATAATTTAGATGCTAATGGAAATGCATCATATGCATTTAATATGTAT
TACCAGGTTCAGAATCAATTAGATTTGAGTTGTGATTTTCAAGGATTGGCAATGGTCACT
GACAAGAATATATCTCAAGGAACTTGTAATTTTATTATTCAGACAGGTATTTACTCTGTC
TCTTCCAAGGTTTTGCCTGGGATTGTTGTATTGCTAAGTGGCTTCACATTTCTTTTACTG
TAG

Peptide Sequence

PEP ID

XP_016447982.1
PEP Infomation

PREDICTED: glucan endo-1,3-beta-glucosidase 8-like [Nicotiana tabacum]
Sequence

MLRLGVLVVVLYFLVYLGDNKRSVEGLGVNWGTMASHPLEPKIVVQMLKENGIKKVKLFD
ADKTSMNALAGTDIEVMVAIPNDQLLTMTDYDRAKDWVRRNVTRYNIKSGVNIKYVAVGN
EPFLTAYNNSFVNLTFPALQNIQNALNEAGVGDYIKATVPLNADVYFSPESNPVPSAGRF
RPDIAELMTQIVQFMSKNQAPFTVNIYPFLSLYANEHFPFDFAFFDGASNPVVDNGVEYT
NVFDANFDTLYSALKAVGYGNTTILVGEVGWPTDGDKNANLNNAYRFYKGLFSRLGANKG
TPLRPGYIEVYLFGLIDEDAKSIAPGNFERHWGIFRYDGQPKFAMDISGQGHEKHLVAAK
NVQYLPKRWCMLNPNANNLSILANNIDYACTFSDCTALGYGSSCNNLDANGNASYAFNMY
YQVQNQLDLSCDFQGLAMVTDKNISQGTCNFIIQTGIYSVSSKVLPGIVVLLSGFTFLLL

Transcript Sequence

Gene sequence data has not been registered.